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TNF cytokines and their Receptors

TNF cytokines and their Receptors

The human body is a complex and intricate system where various components work together to maintain health and combat potential threats. Among these essential players are the TNF cytokines, a superfamily of cell-signaling proteins that play a crucial role in regulating the immune system and other critical physiological processes. These cytokines, along with their corresponding receptors, form a dynamic network that orchestrates immune responses, inflammation, cell survival, and much more. In this blog post, we'll delve into the world of TNF cytokines and their receptors, exploring their structural features, functions, and the significant impact they have on our health and well-being. Get ready to uncover the science behind these tiny yet mighty signaling molecules that hold the key to understanding immune regulation and the treatment of various diseases!

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TNF Cytokines

Tumor Necrosis Factor (TNF) cytokines form a significant group of cell-signaling proteins with crucial roles in regulating the immune system and various cellular processes. These cytokines are involved in a wide range of physiological functions, including inflammation, apoptosis (cell death), cell survival, and immune response modulation. Understanding the functions and interactions of TNF cytokines holds immense promise for developing targeted therapies to combat autoimmune disorders, inflammatory conditions, and certain types of cancer. In this context, exploring the fascinating realm of TNF cytokines offers valuable insights into the intricate workings of the immune system and potential avenues for therapeutic interventions.

TNF Superfamily - Features

  1. Trimeric Ligands: All TNF superfamily members are characterized by their trimeric ligand structure. Each member is composed of three identical subunits that form a stable trimeric arrangement. This trimeric structure is crucial for their binding to specific receptors on target cells and initiating downstream signaling events.
  2. Transmembrane or Soluble Forms: TNF superfamily members can exist in both transmembrane and soluble forms. Transmembrane forms are anchored to the cell membrane, whereas soluble forms can be released into the extracellular environment following proteolytic cleavage from the membrane-bound precursor. Soluble forms of TNF superfamily cytokines often act as potent signaling molecules, modulating cell functions in a paracrine or autocrine manner.

Structure of TNF Alpha. Source: PDB

The C-terminal TNF Homology Domain

The C-terminal TNF homology domain refers to a specific region found at the carboxy-terminal end of certain proteins within the TNF superfamily. The TNF homology domain is also known as the THD or TNF homology region.

This domain is a conserved structural feature shared by several members of the TNF superfamily, including TNF-alpha, TNF-beta, and lymphotoxins (LT-alpha and LT-beta). The TNF homology domain is crucial for the biological activity of these cytokines.

The TNF homology domain consists of approximately 150 amino acid residues and adopts a characteristic fold known as the "jelly-roll" fold, which resembles a β-sandwich. It contains several β-strands arranged in a characteristic manner, stabilized by disulfide bonds formed between cysteine residues.

Functionally, the TNF homology domain is responsible for binding to the Cysteine-rich domains of their specific receptors.

TNF Superfamily Members

Listed below are the ligands that make up the TNF superfamily, along with their function and their specific receptors

TNF Superfamily Member Gene Name Synonyms Function Receptor

TNF

TNFα, TNSFSF2, TNFA, DIF, Cachectin, TNLG1F

Regulates immune response and inflammation.

LTA

TNFB, TNFSF1, LT, LT-Alpha, TNF-Beta, TNLG1E

Induces Immune response, plays a role in secondary lymphoid organ development and tumorigenesis

TNFR1, TNFBR, HVEM (homodimer)

LTBR (heterodimer with LTB)

LTB

TNFSF3, TNFC, P33, LT-Beta, TNLG1C

Induces Immune response, plays a role in secondary lymphoid organ development and tumorigenesis

TNFSF10

Apo-2L, TRAIL, CD253, L2, TANCR, NLG6A

Apoptosis inducer, regulates angiogenesis

FASLG

APT1LG1, TNFSF6, CD178, FasL, CD95L, TNLG1A

Involved in cytotoxic T-cell mediated Apoptosis, NK Cell mediated apoptosis and T cell Development

CD40LG

CD40L, TRAP, TNFSF5, CD154, HIGM1, T-BAM, IGM

Involved in B cell activation, NF kappa B Signalling and anti-apoptic signalling

TNFSF12

TWEAK, DR3LG, APO3L,TNLG4A

Promotes Angiogenesis, Endothelial Cell Proliferation, induction of inflammatory cytokines, promotes IL8 secretion

FN14, APO3

TNFSF13B

TALL-1, BLYS, THANK, CD257, DTL

Stimulates B cell Proliferation, regulates the differential expression of genes in innate immune system and apoptosis

TNFSF13

TALL-2, TRDL-1, ZTNF2, TNF-related Death Ligand, TNLG7B

Regulates tumor cell growth and m be involved in monocyte/macrophage mediated immunity

TNFSF11

TRANCE, RANKL, OPGL CD254, SOdf

Dendritic cell maturation and tissue growth (bone regeneration)

TNFSF4

CD252, TXGP1, Gp34, CD134L

Stimulates T cell Proliferation and Cytokine production

TNFSF9

CD252, TXGP1, Gp34, CD134L

Induces activated peripheral blood T cell proliferation

CD70

CD27L, TNFSF7, TNLG8A, LPFS3

Involved in maintaining T cell Immunity, during antiviral responses

TNFSF14

HVEM-L, CD258,

Induces T cell Proliferation and IFNG production

TNFSF18

HGITRL, TL6, AITRL, GITRL

Regulates T cell survival

TNFSF8

CD30LG CD153, TNLG3A

Induces T cell Proliferation

TNFSF15

VEGI, TL1, TL1A, VEGI192A, TNLG1B

Inhibits angiogenesis

EDA-A1, EDA-A2, EDA-A3, EDA-A4,

EDA

Involved in Ectodermal Tissue Development

EDAR, EDA2R

Key Members of TNF Family

The TNF family is comprised of threemembers - TNF alpha, TNF-beta and TNF-C

TNF Alpha

TNF-alpha, also known as Cachectin, is a potent pro-inflammatory cytokine produced primarily by activated macrophages, T cells, and natural killer cells. It exists as a homotrimer and plays a crucial role in initiating and amplifying inflammatory responses. TNF-alpha's expression is upregulated during infection, inflammation, and immune responses, where it triggers a cascade of downstream signaling events upon binding to its receptors, TNFR1 and TNFR2. Through these receptors, TNF-alpha activates complex signaling pathways, such as NF-κB and MAPK, influencing various biological processes, including the regulation of immune cells, induction of pro-inflammatory mediators, and promotion of cell death. However, dysregulated TNF-alpha activity has been associated with chronic inflammatory conditions, such as rheumatoid arthritis, psoriasis, and inflammatory bowel disease. Consequently, therapeutic interventions targeting TNF-alpha have proven effective in managing these diseases. TNF inhibitors, including biologic drugs like Infliximab and Etanercept, have revolutionized the treatment of these conditions, providing significant relief to patients and improving their quality of life.

TNF Beta/ Lymphotoxin Alpha

TNF-beta, also known as Lymphotoxin-α, shares structural homology with TNF-alpha and is mainly produced by activated T cells. Like TNF-alpha, TNF-beta exists as a homotrimer and binds to the same receptors, TNFR1 and TNFR2, initiating similar downstream signaling pathways. TNF-beta plays a critical role in immune regulation and inflammation, contributing to the formation and organization of lymphoid tissues and the immune response against infections. Additionally, TNF-beta is involved in the activation of cytotoxic T cells, which are important for eliminating infected or cancerous cells. Dysregulated TNF-beta activity has been implicated in certain autoimmune disorders and graft-versus-host disease, where the immune system attacks healthy tissues or transplanted organs. Understanding the role of TNF-beta in these diseases has opened up possibilities for targeted therapeutic approaches to modulate its activity.

Lymphotoxin Beta/TNC

TNF-C, or Lymphotoxin-β, is another essential member of the TNF superfamily, structurally related to both TNF-alpha and TNF-beta. TNF-C plays a crucial role in lymphoid organ development and is involved in the maintenance of lymphocyte homeostasis. It signals through the same receptors as TNF-beta, TNFR1, and TNFR2, and influences immune responses, particularly in the context of adaptive immunity and secondary lymphoid organ formation. Defects in TNF-C or its receptor have been associated with impaired lymph node development and compromised immune responses.

TNF Receptor Superfamily

The Tumor Necrosis Factor (TNF) receptor superfamily comprises a group of cell surface receptors that play essential roles in mediating the effects of various TNF superfamily cytokines. These receptors are critical components of the immune system and are involved in regulating diverse biological processes, including cell survival, apoptosis, inflammation, and immune responses.

Structural features of the TNF Receptor Family

The TNF receptor family shares common structural features, which are critical for their function as cell surface receptors that mediate the effects of TNF superfamily cytokines. The structural features of the TNF receptor family include:

Extracellular Domain - Cysteine-Rich Domain (CRD)

The extracellular region of TNF receptors contains conserved structural domains that are involved in ligand binding. The primary domain responsible for ligand recognition is the cysteine-rich domain (CRD). This domain contains multiple cysteine residues that form disulfide bonds, contributing to the structural stability of the receptor and its ability to interact with specific TNF superfamily cytokines.

Transmembrane Domain

TNF receptors are transmembrane proteins, meaning they span the cell membrane. The transmembrane domain anchors the receptor to the cell surface, allowing the extracellular domain to interact with ligands in the extracellular environment while the intracellular domain communicates with intracellular signaling components.

Intracellular Domain

The cytoplasmic region of TNF receptors contains specific signaling motifs that determine the type of signaling pathway the receptor can activate.

Death Domain

The death domain is a conserved protein structural motif found in certain members of the TNF receptor superfamily, specifically in the intracellular regions of some TNF receptors. When TNF cytokines bind to these receptors, they trigger the assembly of death-inducing signaling complexes (DISCs). This assembly involves the oligomerization of death domains within the receptors, leading to the recruitment and activation of various intracellular signaling proteins. The DISC formation initiates apoptosis, a form of programmed cell death, and regulates immune responses, inflammation, and tissue homeostasis. Properly regulated death domain signaling is crucial for maintaining normal immune function and cell survival. Dysregulation of these pathways can lead to autoimmune disorders or impaired immune responses. Overall, the presence of death domains in TNF receptors allows them to mediate critical signaling events that determine cell fate and immune regulation.

Written by Rithika Suresh

Rithika Suresh completed her undergraduate degree in Biotechnology in Anna University before completing her masters in Biotechnology at University College Dublin.

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27th Jul 2023 Rithika Suresh

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