POLR3D

POLR3D

Target · RNA polymerase subunit

POLR3D RNA polymerase III subunit D · DNA-directed RNA polymerase III subunit RPC4

POLR3D (RNA polymerase III subunit D, also known as RPC4, C53, BN51T and TSBN51) is a peripheral component of RNA polymerase III, the enzyme that transcribes small non-coding RNAs in the nucleus. It also acts as a DNA sensor in innate immunity. Browse Assay Genie's current range of POLR3D research reagents below, or read on for the biology behind the target.

Nuclear localisationRNA polymerase III subunitCytosolic DNA sensor
398 aa
Protein length
~44 kDa
Molecular weight
8p21.3
Gene locus
RNA pol subunit
Protein family
Target information

What is POLR3D (RNA polymerase III subunit D)?

DNA-dependent RNA polymerases catalyse the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. POLR3D is a specific peripheral component of RNA polymerase III (Pol III), which synthesises small non-coding RNAs including 5S rRNA, snRNAs, tRNAs and miRNAs from at least 500 distinct genomic loci. POLR3D assembles with POLR3E (RPC5) to form a subcomplex that binds the Pol III core.

Within the transcription cycle, the POLR3D protein enables recruitment of Pol III at the transcription initiation site and drives initiation from both type 2 and type 3 DNA promoters. It is also required for efficient transcription termination and reinitiation. The POLR3D gene belongs to the HGNC gene group of RNA polymerase subunits, and the protein is a member of the eukaryotic RPC4/POLR3D RNA polymerase subunit family. It is located in the nucleus.

Beyond transcription, Pol III plays a key role in sensing and limiting infection by intracellular bacteria and DNA viruses. It acts as a nuclear and cytosolic DNA sensor in the innate immune response, and can sense non-self double-stranded DNA that serves as a template for transcription into double-stranded RNA. Non-self Pol III transcripts, such as Epstein-Barr virus-encoded RNAs (EBERs), induce type I interferon and NF-kappa-B through the RIG-I pathway. The gene was named for its ability to complement a temperature-sensitive mutant from the BHK-21 Syrian hamster cell line, which blocks progression through the G1 phase of the cell cycle at nonpermissive temperatures; hence the earlier name BN51 (BHK21) temperature sensitivity complementing.

Pol III transcription

POLR3D supports Pol III recruitment, initiation from type 2 and type 3 promoters, termination and reinitiation, making it relevant to small non-coding RNA synthesis.

Innate immune sensing

Pol III acts as a nuclear and cytosolic DNA sensor that helps limit infection by intracellular bacteria and DNA viruses.

Viral RNA and interferon

Pol III transcripts such as EBERs induce type I interferon and NF-kappa-B through the RIG-I pathway.

Cell cycle research

The gene complements a temperature-sensitive BHK-21 mutant that blocks G1 progression at nonpermissive temperatures, linking it to cell cycle studies.

Background

POLR3D frequently asked questions

What does POLR3D do?

POLR3D is a peripheral subunit of RNA polymerase III. It forms a subcomplex with POLR3E that binds the Pol III core, enables recruitment to the initiation site, drives initiation from type 2 and type 3 promoters, and supports efficient termination and reinitiation.

What other names does POLR3D go by?

POLR3D is also called RPC4, C53, BN51T and TSBN51. UniProt lists it as DNA-directed RNA polymerase III subunit RPC4. Earlier HGNC names include BN51 (BHK21) temperature sensitivity complementing and polymerase (RNA) III (DNA directed) polypeptide D, 44kDa.

Is POLR3D linked to immunity, and does it have a mouse ortholog?

Yes. Pol III senses non-self DNA by transcribing it into double-stranded RNA, which triggers type I interferon and NF-kappa-B through RIG-I. The mouse ortholog is Polr3d. Check the datasheet of any product for its validated reactivity.

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Related targets

Other RNA polymerase subunits, including the Pol III partner POLR3E and subunits of RNA polymerases I and II.

Gene and protein annotations from HGNC, NCBI Gene and UniProt P05423; product specifications from Assay Genie datasheets.

POLR3D Product listing

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