TRA2A

TRA2A

Target · Splicing factor

TRA2A Transformer-2 protein homolog alpha · transformer 2 alpha homolog

TRA2A (transformer 2 alpha homolog) is a nuclear, sequence-specific RNA-binding protein that participates in the control of pre-mRNA splicing. It is also known as htra-2-alpha or AWMS1 and belongs to the splicing factor SR family. Browse Assay Genie's current range of TRA2A research reagents below, or read on for the biology behind the target.

Nuclear proteinSR family splicing factorPhosphorylated RNA-binding protein
282 aa
Protein length
~33 kDa
Molecular weight
7p15.3
Gene locus
SR family
Protein family
Target information

What is TRA2A (transformer 2 alpha homolog)?

TRA2A is a sequence-specific RNA-binding protein that takes part in the control of pre-mRNA splicing. According to the NCBI Gene summary, the phosphorylated nuclear protein binds to specific RNA sequences and plays a role in regulating how pre-mRNA transcripts are spliced. UniProt classifies it within the splicing factor SR family, and its subcellular location is the nucleus.

The TRA2A gene is a member of the transformer 2 homolog family and encodes a protein containing several RRM (RNA recognition motif) domains, which mediate its RNA binding. HGNC places the gene in the RNA binding motif containing group. Alternatively spliced transcript variants have been reported for the gene, so researchers studying the TRA2A protein should consider that more than one transcript can arise from it. The mouse ortholog is Tra2a.

The gene was originally named for its relationship to the Drosophila transformer 2 gene, and the previous HGNC name was transformer 2 alpha homolog (Drosophila). Other names in use include htra-2-alpha and AWMS1. A closely related family member, TRA2B, is also part of the transformer 2 homolog family and is often studied alongside TRA2A in work on splicing regulation.

Pre-mRNA splicing regulation

TRA2A participates in the control of pre-mRNA splicing, making it a relevant factor for studying how splice site choice is regulated.

RNA-protein interactions

TRA2A is a sequence-specific RNA-binding protein with RRM domains that binds defined RNA sequences, supporting work on RNA recognition.

SR protein biology

As a member of the splicing factor SR family, TRA2A is used to explore how SR proteins act in the nucleus.

Transcript variant analysis

Alternatively spliced transcript variants of TRA2A have been described, which is relevant for studies of isoform-specific gene expression.

Background

TRA2A frequently asked questions

What does TRA2A do?

TRA2A is a sequence-specific RNA-binding protein that participates in the control of pre-mRNA splicing. It is a phosphorylated nuclear protein that binds to specific RNA sequences through its RRM domains and belongs to the splicing factor SR family.

What other names does TRA2A go by?

TRA2A is also called htra-2-alpha and AWMS1. Its full HGNC name is transformer 2 alpha homolog, previously transformer 2 alpha homolog (Drosophila), and UniProt lists it as Transformer-2 protein homolog alpha. The gene produces alternatively spliced transcript variants.

Is TRA2A conserved across species?

The name reflects homology to the Drosophila transformer 2 gene, and the mouse ortholog is Tra2a. TRA2A belongs to the transformer 2 homolog family alongside TRA2B. Check the datasheet of any product for its validated reactivity.

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Related targets

TRA2B, the other transformer 2 homolog family member, and further targets with similar names at Assay Genie.

Gene and protein annotations from HGNC, NCBI Gene and UniProt Q13595; product specifications from Assay Genie datasheets.

TRA2A Product listing