URB1

URB1

Target · Ribosome biogenesis factor

URB1 URB1 ribosome biogenesis factor · Nucleolar pre-ribosomal-associated protein 1

URB1 (URB1 ribosome biogenesis factor, also known as NPA1, KIAA0539 and C21orf108) is a nucleolar protein that binds RNA and is predicted to act in the maturation of ribosomal RNA. UniProt lists it as nucleolar pre-ribosomal-associated protein 1. Browse Assay Genie's current range of URB1 research reagents below, or read on for the biology behind the target.

Nucleolar proteinRNA-binding, rRNA maturationHost of snoRNA genes
2271 aa
Protein length
~254 kDa
Molecular weight
21q22.11
Gene locus
Ribosome factor
Protein class
Target information

What is URB1 (URB1 ribosome biogenesis factor)?

URB1 is an RNA-binding protein associated with ribosome biogenesis. According to the NCBI Gene summary, it is predicted to be involved in the maturation of 5.8S rRNA and of large subunit rRNA (LSU-rRNA) from the tricistronic rRNA transcript, which contains the small subunit rRNA, 5.8S rRNA and LSU-rRNA. UniProt annotates the protein as nucleolar pre-ribosomal-associated protein 1 and places it in the nucleus, in the nucleolus, the site of ribosome assembly. The NCBI summary also describes it as located in the fibrillar centre.

The URB1 gene is classed by HGNC in three groups: armadillo like helical domain containing, ribosome biogenesis factors, and small nucleolar RNA protein coding host genes. The last group indicates that the locus also hosts small nucleolar RNA genes. The mouse ortholog is Urb1, which is useful for researchers designing comparative studies of the URB1 gene and its protein product.

The gene has had several names. Its aliases and previous symbols include KIAA0539, NPA1 and C21orf108, and earlier HGNC names include URB1 ribosome biogenesis 1 homolog (S. cerevisiae) and chromosome 21 open reading frame 108. These names are worth searching when reviewing older literature on URB1 and nucleolar pre-ribosomal-associated protein 1.

Ribosome biogenesis

URB1 is classed as a ribosome biogenesis factor, making it relevant to studies of how ribosomal subunits are assembled.

rRNA processing

URB1 is predicted to contribute to 5.8S rRNA and LSU-rRNA maturation from the tricistronic rRNA transcript.

Nucleolar biology

URB1 localises to the nucleolus, with the NCBI summary noting the fibrillar centre, so it informs studies of nucleolar organisation.

RNA-binding proteins

URB1 enables RNA binding activity, which makes it a candidate for work on protein-RNA interactions in pre-ribosomal complexes.

Background

URB1 frequently asked questions

What does URB1 do?

URB1 enables RNA binding and is predicted to be involved in the maturation of 5.8S rRNA and LSU-rRNA from the tricistronic rRNA transcript. It is a nucleolar protein, and HGNC classifies it as a ribosome biogenesis factor.

What other names does URB1 go by?

URB1 is also known as NPA1, KIAA0539 and C21orf108. UniProt names the protein nucleolar pre-ribosomal-associated protein 1. Earlier HGNC names include URB1 ribosome biogenesis homolog and URB1 ribosome biogenesis 1 homolog (S. cerevisiae).

Does URB1 have orthologs in other species?

A mouse ortholog, Urb1, is recorded. The earlier HGNC name referring to the S. cerevisiae homolog points to a yeast counterpart. Check the datasheet of any product for its validated reactivity.

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Related targets

Other ribosome biogenesis factors and nucleolar proteins with products at Assay Genie.

Gene and protein annotations from HGNC, NCBI Gene and UniProt O60287; product specifications from Assay Genie datasheets.

URB1 Product listing

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